Showing posts with label regenerative medicine. Show all posts
Showing posts with label regenerative medicine. Show all posts

Saturday, July 9, 2011

Biosingularity Revolution Pushes Against Economic Collapse

Image via NextBigFuture

A revolution in regenerative medicine, genetic recombineering, synthetic biology, systems biology, and several other points of the biosingularity are pushing ahead despite three years of global economic downturn and counting, since the fall of 2008.

Brian Wang introduces us to the "accelerated evolution machine," pictured above.
Say hello to the evolution machine. It can achieve in days what takes genetic engineers years. So far it is just a prototype, but if its proponents are to be believed, future versions could revolutionise biology, allowing us to evolve new organisms or rewrite whole genomes with ease. It might even transform humanity itself.

...Because biological systems are so complex, it is a huge advantage to be able to tweak lots of genes simultaneously, rather than one at a time, she says. "In almost every case you'll get a different solution that's a better solution."

...By automating selection and using a few tricks, though, it should be practical to screen for far more subtle characteristics. For instance, biosensors that light up when a particular substance is produced could be built into the starting strain. "The power going forward will have to do with clever selections and screens," says Church.

As revolutionary as this approach is, Church thinks MAGE's most far-reaching potential lies elsewhere. He reckons it will be possible to use the evolution machine to make many thousands of specific changes to a cell's DNA: essentially, to rewrite genomes.

At the moment, making extensive changes to even the smallest genome is extremely costly and laborious. Last year, the biologist and entrepreneur Craig Venter announced that his team had replaced a bacterium's genome with a custom-written one (Science, vol 329, p 52). His team synthesised small pieces of DNA with a specific sequence, and then joined them together to create an entire genome. It was an awesome achievement, but it took 400 person-years of labour and cost around $40 million.

MAGE can do the same job far more cheaply and efficiently by rewriting existing genomes, Church thinks. The idea is that instead of putting DNA strands into the machine with a range of different mutations, you add only DNA with the specific changes you want. Even if you are trying to change hundreds or thousands of genes at once, after a few cycles in the machine, a good proportion of the cells should have all the desired changes. This can be checked by sequencing.

...As the technology improves and becomes routine, says Church, it could also be used to alter the cells used for cell-based therapies. Tissue-engineered livers grown from stem cells, say, could have their genetic code altered so that they would be immune to liver-destroying viruses such as hepatitis C. _NewScientist_via_NBF

The "evolution machine" has its work cut out for it, but it may very well speed up some projects which do not depend upon significant transformations of the genome. More sizeable genomic transforms are not likely to be possible using such a simplist approach. But future generations of such machines are likely to grow sophisticated enough to make the work of future Craig Venters much faster and simpler.
Researchers at the LA Children's Hospital built a fully functioning artificial small intestine in mice.

A man from Eritrea was recently given an artificial trachea transplant in Sweden. The trachea was grown on a scaffold inside a bioreactor.

Scientists have isolated the human blood cell progenitor stem cell, which is capable of growing all the various cellular components of the blood system.

Johns Hopkins researchers have identified a "super neural precursor stem cell" which can not only differentiate into specialised brain cells, but can also reproduce itself!

A partial list of companies involved in regenerative medicine research and development

The US has been the world's driver of scientific and biomedical R&D for several decades now. There has been some question as to how long American research could maintain its drive, if the nation's economy was dragged down by dysfunctional governmental economic and regulatory policies. Yet, despite the current US government's apparent war against the private sector, some areas of private R&D are still thriving -- although not as well as prior to the fall of 2008.

It is vital that private sector financing be central to advanced R&D, to prevent the type of politicisation of science which has frozen climatology in an infantile state of biased activism (via GWPF), rather than dispassionate observation and honest hypothesis testing.
Federal domination of science funding has two quite intended consequences: both individual scientists and major universities have become wards of Washington. For decades, academic sociologists have noted that almost all faculty party affiliations are with the Democrats. This is no conspiracy–it is merely like-minded individuals hiring other like minds and voting their best interest. _Forbes

Tuesday, December 14, 2010

News from the Biosingularity

SD
The drug lenalidomide -- related to thalidomide -- may prove to be one of the first in a long line of revolutionary anti-aging medications to slip through the back door of conventional medicine.
In this study, the team tested the drug in healthy seniors, each of whom were matched in race, gender and national origin to a healthy young adult participant. They found that extremely low levels of lenalidomide - 0.1 μM - optimally stimulated IL-2 production in the young people (21-40 years) roughly sevenfold, but stimulated IL-2 production in patients over age 65 by 120-fold, restoring them to youthful levels for up to five days. At that dosage, the drug also increased IFN-gamma up to six fold in the elderly patients, without suppressing IL-17 generation.

The researchers also found that lenalidomide had many other beneficial effects on the elderly participants' T cells, including better migration throughout the body, more efficient patrolling activity and longer survival after defending the body against an infection. _SD
Not for pregnant women, certainly, but not many women over the age of 65 are getting pregnant accidentally.

Another approach to prolonged youthfulness may come by way of "cord blood", blood from the umbilical cord which is obtained at birth. Apparently cells present in cord blood are capable of producing regenerative factors capable of rejuvenating the aging brain.
Laboratory culture (in vitro) studies examining the activity of human umbilical cord blood cells (HUCB) on experimental models of central nervous system aging, injury and disease, have shown that HUCBs provide a ‘trophic effect’ (nutritional effect) that enhances survival and maturation of hippocampal neurons harvested from both young and old laboratory animals.

“As we age, cognitive function tends to decline,” said Alison E. Willing, PhD, a professor in the University of South Florida’s (USF) Department of Neurosurgery and Brain repair and lead author for a study published in the current issue of Aging and Disease (www.aginganddisease.org) . “Changes in cognitive function are accompanied by changes in the hippocampus, an area of the brain where long term memory, as well as other functions, are located, an area of the brain among those first to suffer the effects of diseases such as Alzheimer’s disease.” _SB
The type of rejuvenation of hippocampal cells demonstrated by the USF researchers suggests that it may be worth our while to keep a culture of HUCBs (or useful substitutes) safe and handy for the sake of our older selves.

Another useful approach to rejuvenating the brain besides pharmaceuticals or stem cell therapies may involve the electromagnetic stimulation of the brain.
Shooting steady pulses of electricity through slender electrodes into a brain area that controls complex behaviors has proven to be effective against several therapeutically stubborn neurological and neuropsychiatric disorders. Now, a new study has found that this technique, called deep brain stimulation (DBS), targets the same class of neuronal cells that are known to respond to physical exercise and drugs such as Prozac.

The study, led by Associate Professor Grigori Enikolopov, Ph.D., of Cold Spring Harbor Laboratory (CSHL), is the cover story in the January 1st issue of The Journal of Comparative Neurology, which is currently available online.

The targeted neuronal cells, which increase in number in response to DBS, are a type of precursor cell that ultimately matures into adult neurons in the brain’s hippocampus, the control center for spatial and long-term memory, emotion, behavior and other functions that go awry in diseases such as Alzheimer’s, Parkinson’s, epilepsy and depression. DBS has been successful in treating some cases of Parkinson’s. And recently, it has also proven to work against other brain disorders such as epilepsy and severe depression. _SB
It is likely that routine maintenance for aging humans in the near future will include a wide range of therapies, including stem cells, EM therapies, rejuvenating drug therapies, and nanotech approaches.

Researchers at Salk and Princeton have discovered new ways in which the oncogene protein p53 is useful in the control of cancer. It seems that besides suppressing the early stages of cancer transformation, p53 also suppresses later stage local spread and distant metastasis.
A close collaboration between researchers at the Salk Institute for Biological Studies and the Institute for Advanced Study found that the tumor suppressor p53, long thought of as the "Guardian of the Genome," may do more than thwart cancer-causing mutations. It may also prevent established cancer cells from sliding toward a more aggressive, stem-like state by serving as a "Guardian against Genome Reprogramming." _PO
This opens the door to the use of p53 enhancing therapies in persons whose cancers are already well established -- in the hope of slowing the progression of the disease to allow other therapies to eradicate it.

Another good source of news on the biosingularity front (as well as other science and technology news) is Nextbigfuture:

New artificial bone material to healing from bony injury

New advanced tools for genetic manipulation and engineering

Pluripotent stem cells from adult tissues finding wider use in research

Anyone who has studied Nanomedicine or followed SENS understands that the tools discussed above are just scratches in the surface of the coming biosingularity. But even such scratches may well mean the difference between life and death, vitality and atrophy, mental sharpness and senility, to some who are reading this.

Friday, October 22, 2010

Keeping Abreast (or two) of Regenerative Medicine

Regenerative medicine is based upon thebody's ability to build itself -- and to often re-build itself after injury.  We are seeing breakthroughs in stem cell technologies virtually every week.  New technologies that allow physicians to use a patient's own cells to re-build a lost or damaged body part will avoid problems with immune rejection and ethical objections.  And if the touchstone for the explosion of regenerative medicine happens to be the human breast -- who can complain?

How to Build a New Breast


Cytori’s process for reconstructing or augmenting breasts relies on the recent discovery that human fat contains an amazing concentration of stem cells—cells that can be separated out using a centrifuge. That’s the science part. The artistry comes in when the surgeon makes tiny incisions for depositing the enriched fat cells, building a breast one dot-sized injection at a time like a 3-D pointillist. Here’s how it works.

Step 1 Liposuction

Breast reconstruction usually starts in the abdomen, using liposuction to harvest fat cells. Each liposuction syringe holds about 60 cc (2 fluid ounces) of fat cells and takes five minutes to fill. Repairing the divot caused by an average lumpectomy requires eight to 10 syringes to get about 360 cc of fat tissue. Half the fat is used to create the volume needed to fill the divot and half is processed to isolate stem and regenerative cells. A typical augmentation requires 800 cc (27 ounces) of liposuctioned fat: Volume varies, but in one study 160 cc of injected stem-cell-enriched tissue boosted breast circumference an average of 4 centimeters (1.6 cup sizes).

Step 2 Centrifugation

The liposuctioned fat is injected into the Celution System. ›› The fat cells are then “washed” with proprietary enzymes that break down the scaffolding that holds the fat cells together. ›› Next, a centrifuge separates the fat cells from the stem and regenerative cells, concentrating them into a pellet, which is then extracted. ›› The pellet of cells is added back to some of the liposuctioned fat cells, producing a liquid suspension enriched with stem and regenerative cells and ready for injection.

Step 3 Injection


Using a tool called the Celbrush, the surgeon repeatedly deposits the enriched cells in the breast, either at the site of a lumpectomy or throughout the breast for augmentation or repair of a mastectomy.
With reconstruction patients, the tip on the brush makes tiny cuts that perforate scarred areas, transforming the bed of damaged tissue into a biological mesh. The Celbrush releases 0.5 cc of cell-enriched tissue each time the surgeon moves its control wheel. The process typically takes a couple of hours, depending on the extent of treatment. The deposited tissue bonds quickly to the existing tissue. Within 48 hours, new capillaries and blood vessels entwine through the new cells, supplying oxygen and nutrients to the now-stable tissue. ›› The injection area isn’t painful afterward; patients go home the same day.
Source

More from Brian Wang

Monday, August 23, 2010

Advances in Regenerative Medicine

The promise of regenerative medicine involves a future where replacement organs and tissues can be re-grown in a lab from a person's own cells, then transplanted into the person as brand-new, fully functioning replacement tissue. Replacement lung tissue, replacement heart tissue, replacement ligaments and tendons, replacement skin, kidneys, muscle, intestine, bladders, and on and on. But first, scientists have to find a good way to grow millions and billions of healthy stem cells from a person's own cells, and keep them alive long enough to turn them into the proper tissue, and grow them on a proper scaffold into the proper replacement organs.
Investigators from the Massachusetts Institute of Technology (MIT) recently developed a new type of support structure for stem cells, which allows them to remain alive for weeks without using any foreign genetic material.

Generally, substrates for growing stem cells contain animal cells or tissue, but these can easily contaminate the samples themselves, which means that they can lose some of their capabilities.

This is an especially serious consequence for induced pluripotent stem cells, which are biological units that can transform into any type of tissue in the human body.

Only environmental conditions dictate whether they will turn into nerve cells, or into pancreatic tissue.

Due to this amazing differentiation ability they have, these cells hold great promise for treating a number of disorders, such as for example Parkinson's, multiple sclerosis and spinal cord injuries.

But, in order to make the best of them, researchers need to be able to grow them in sufficiently large quantities, and this is proving to be extremely difficult due to the lack of proper substrates.

One of the main issues in this field of research is the fact that human stem cells are now grown with the aid of cells or proteins derived from mice embryos. If these foreign chemicals would interact with the human body, they would definitely cause an allergic reaction.

Thanks to the MIT collaborations, which includes biologists, materials engineers and chemists, scientists now have a synthetic surface that features no material from mice or other animals.

The data the team recorded of the new surfaces show that they promote and sustain “all-natural” stem cell growth and reproduction for at least three months. Longer periods are also possible, the group says.

Another impressive feat the MIT experts achieved with their new material is the fact that it allows for researchers to separate colonies of identical cells from each other. The surface allows single cells to form colonies of cells of that type with considerable ease.

Details of the new investigation appear in the August 22 issue of the esteemed scientific publication Nature Materials, e! Science News reports. _Softpedia
Another report from ScienceDaily

“For therapeutics, you need millions and millions of cells. If we can make it easier for the cells to divide and grow, that will really help to get the number of cells you need to do all of the disease studies that people are excited about,' says MIT postdoctoral associate Krishanu Saha, one of the co-first authors of the paper. 

The work was led by MIT professors Robert Langer, Rudolf Jaenisch and Daniel G. Anderson, in collaboration with Saha and postdoctoral researcher Ying Mei. _Softpedia

This report from Brian Wang on Swiss stem cell research, suggests that mature tissue-derived stem cells can be programmed across germ layer boundaries. This finding hints at the possibility of creating virtually any type of cell or tissue from any other type of tissue -- including easily sampled tissues such as skin or blood.

More: Australian researchers at UNSW have developed a process of inducing pluripotent stem cells, iPS, without the use of viruses or "genetic manipulation". Their aim is to generate brain cells to study and treat degenerative brain diseases.

Cross-posted to Al Fin Longevity

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